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Welcome to the Open Chromosome Collective!

We are a group of computational biologists working on chromosome structure and interested in developing open source tools for the wider community.

We are particularly interested in the 3D organization of chromosomes, and most of the tools are focused on the analysis of data obtained using Hi-C and related technologies. We like our tools to be easy to use, flexible, to facilitate active development of novel analytical approaches, and scalable, to make use of the latest and largest datasets.

For analysis of Hi-C (and related) data, we have a suite of tools:


Please interact with us on GitHub (we are open!), or join our Slack for more interactive discussions.

For contributors: